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Table 1 Comparison of molecular analysis effectiveness on exuviae samples per arthropod species

From: Assessment of MALDI-TOF MS for Arthropod Identification Based on Exuviae Spectra Analysis

Species

Fresh specimens (n = 5)

Exuviae (n = 12)

Stage

Body parta

Stage

Body parta

Number of PCR success (%)b

Number of sequencing success (%)b

Number of target sequence success (%)b

Best Match Accession Number (NCBi)

P. humanus corporis

Adults

Whole

3th instars

Whole

0 (-)

/

/

/

Ae. aegypti

Pupae

Whole

Pupae

Whole

0 (-)

/

/

/

An. coluzzii

Pupae

Whole

Pupae

Whole

5 (41.6%)

3 (25.0%)

3 (25%)

MT375223.1

B. germanica

Adults

One leg

≥ 3th instars

Whole

7 (58.3%)

3 (25.0%)

3 (25%)

MT467295.1

S. longipalpa

Adults

One leg

≥ 3th instars

Whole

2 (16.6%)

1 (8.3%)

1 (8.3%)

KU543635.1

Cx. lectularius

Adults

Halfc

4-5th instars

Whole

12 (100%)

3 (25.0%)

1 (8.3%)

MN088697.1

Cx. hemipterus

Adults

Halfc

4-5th instars

Whole

12 (100%)

2 (16.7%)

0 (-)

/

T. infestans

Adults

One leg

4-5th instars

Whole

9 (75.0%)

4 (33.3%)

3 (25.0%)

NC_035547.1

Rh. prolixus

Adults

One leg

4-5th instars

Whole

7 (58.3%)

0 (-)

/

/

Total,n (% )d

45

 

108

 

54 (50.0%)

16 (14.8%)

11 (10,2%)

 
  1. aBody part used for DNA extraction. bAmong the 12 exuviae per species. cThe specimens were cut longitudinally, half was used for DNA extraction and the remaining part was stored at -20 °C. dThe proportion among the total number tested, n = 108